A unique species in Phytophthora clade 10, Phytophthora intercalaris sp. nov., recovered from stream and irrigation water in the eastern USA.
Identifieur interne : 000D21 ( Main/Exploration ); précédent : 000D20; suivant : 000D22A unique species in Phytophthora clade 10, Phytophthora intercalaris sp. nov., recovered from stream and irrigation water in the eastern USA.
Auteurs : X. Yang [États-Unis] ; Y. Balci [États-Unis] ; N J Brazee [États-Unis] ; A L Loyd [États-Unis] ; C X Hong [États-Unis]Source :
- International journal of systematic and evolutionary microbiology [ 1466-5034 ] ; 2016.
Abstract
A novel species of the genus Phytophthora was recovered during surveys of stream and nursery irrigation water in Maryland, Massachusetts, North Carolina, Virginia and West Virginia in the USA. The novel species is heterothallic, and all examined isolates were A1 mating type. It produced rare ornamented oogonia and amphigynous antheridia when paired with A2 mating type testers of Phytophthora cinnamomi and Phytophthora cryptogea. Sporangia of this novel species were non-papillate and non-caducous. Thin-walled intercalary chlamydospores were abundant in hemp seed agar and carrot agar, while they were produced only rarely in aged cultures grown in clarified V8 juice agar. Phylogenetic analyses based on sequences of the internal transcribed spacer region and the β-tubulin and mitochondrial cytochrome-c oxidase 1 (cox1) genes indicated that the novel species is phylogenetically close to Phytophthora gallica in Phytophthora clade 10. The novel species has morphological and molecular features that are distinct from those of other species in Phytophthora clade 10. It is formally described here as Phytophthora intercalaris sp. nov. Description of this unique clade-10 species is important for understanding the phylogeny and evolution of Phytophthora clade 10.
DOI: 10.1099/ijsem.0.000800
PubMed: 26620125
PubMed Central: PMC4772590
Affiliations:
- États-Unis
- Caroline du Nord, Maryland, Massachusetts, Virginie
- Amherst (Massachusetts), College Park (Maryland)
- Université du Maryland, Université du Massachusetts
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Balci</name><affiliation wicri:level="4"><nlm:affiliation>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD</wicri:regionArea><placeName><region type="state">Maryland</region><settlement type="city">College Park (Maryland)</settlement></placeName><orgName type="university">Université du Maryland</orgName></affiliation></author><author><name sortKey="Brazee, N J" sort="Brazee, N J" uniqKey="Brazee N" first="N J" last="Brazee">N J Brazee</name><affiliation wicri:level="4"><nlm:affiliation>UMass Extension, Center for Food, Agriculture and the Environment, University of Massachusetts, Amherst, MA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>UMass Extension, Center for Food, Agriculture and the Environment, University of Massachusetts, Amherst, MA</wicri:regionArea><placeName><region type="state">Massachusetts</region><settlement type="city">Amherst (Massachusetts)</settlement></placeName><orgName type="university">Université du Massachusetts</orgName></affiliation></author><author><name sortKey="Loyd, A L" sort="Loyd, A L" uniqKey="Loyd A" first="A L" last="Loyd">A L Loyd</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Pathology, North Carolina State University, Raleigh, NC, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Pathology, North Carolina State University, Raleigh, NC</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation></author><author><name sortKey="Hong, C X" sort="Hong, C X" uniqKey="Hong C" first="C X" last="Hong">C X Hong</name><affiliation wicri:level="2"><nlm:affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA</wicri:regionArea><placeName><region type="state">Virginie</region></placeName></affiliation></author></analytic><series><title level="j">International journal of systematic and evolutionary microbiology</title><idno type="eISSN">1466-5034</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A novel species of the genus <i>Phytophthora</i> was recovered during surveys of stream and nursery irrigation water in Maryland, Massachusetts, North Carolina, Virginia and West Virginia in the USA. The novel species is heterothallic, and all examined isolates were A<sup>1</sup> mating type. It produced rare ornamented oogonia and amphigynous antheridia when paired with A<sup>2</sup> mating type testers of <i>Phytophthora cinnamomi</i> and <i>Phytophthora cryptogea</i>. Sporangia of this novel species were non-papillate and non-caducous. Thin-walled intercalary chlamydospores were abundant in hemp seed agar and carrot agar, while they were produced only rarely in aged cultures grown in clarified V8 juice agar. Phylogenetic analyses based on sequences of the internal transcribed spacer region and the β-tubulin and mitochondrial cytochrome-<i>c</i> oxidase 1 (<i>cox1</i>) genes indicated that the novel species is phylogenetically close to <i>Phytophthora gallica</i> in Phytophthora clade 10. The novel species has morphological and molecular features that are distinct from those of other species in Phytophthora clade 10. It is formally described here as <i>Phytophthora intercalaris</i> sp. nov. Description of this unique clade-10 species is important for understanding the phylogeny and evolution of Phytophthora clade 10.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">26620125</PMID><DateRevised><Year>2019</Year><Month>12</Month><Day>11</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1466-5034</ISSN><JournalIssue CitedMedium="Internet"><Volume>66</Volume><Issue>2</Issue><PubDate><Year>2016</Year><Month>Feb</Month></PubDate></JournalIssue><Title>International journal of systematic and evolutionary microbiology</Title><ISOAbbreviation>Int J Syst Evol Microbiol</ISOAbbreviation></Journal><ArticleTitle>A unique species in Phytophthora clade 10, <i>Phytophthora intercalaris</i> sp. nov., recovered from stream and irrigation water in the eastern USA.</ArticleTitle><Pagination><MedlinePgn>845-855</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1099/ijsem.0.000800</ELocationID><Abstract><AbstractText>A novel species of the genus <i>Phytophthora</i> was recovered during surveys of stream and nursery irrigation water in Maryland, Massachusetts, North Carolina, Virginia and West Virginia in the USA. The novel species is heterothallic, and all examined isolates were A<sup>1</sup> mating type. It produced rare ornamented oogonia and amphigynous antheridia when paired with A<sup>2</sup> mating type testers of <i>Phytophthora cinnamomi</i> and <i>Phytophthora cryptogea</i>. Sporangia of this novel species were non-papillate and non-caducous. Thin-walled intercalary chlamydospores were abundant in hemp seed agar and carrot agar, while they were produced only rarely in aged cultures grown in clarified V8 juice agar. Phylogenetic analyses based on sequences of the internal transcribed spacer region and the β-tubulin and mitochondrial cytochrome-<i>c</i> oxidase 1 (<i>cox1</i>) genes indicated that the novel species is phylogenetically close to <i>Phytophthora gallica</i> in Phytophthora clade 10. The novel species has morphological and molecular features that are distinct from those of other species in Phytophthora clade 10. It is formally described here as <i>Phytophthora intercalaris</i> sp. nov. Description of this unique clade-10 species is important for understanding the phylogeny and evolution of Phytophthora clade 10.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>X</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Balci</LastName><ForeName>Y</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Department of Plant Sciences and Landscape Architecture, University of Maryland, College Park, MD, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Brazee</LastName><ForeName>N J</ForeName><Initials>NJ</Initials><AffiliationInfo><Affiliation>UMass Extension, Center for Food, Agriculture and the Environment, University of Massachusetts, Amherst, MA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Loyd</LastName><ForeName>A L</ForeName><Initials>AL</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, North Carolina State University, Raleigh, NC, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hong</LastName><ForeName>C X</ForeName><Initials>CX</Initials><AffiliationInfo><Affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>11</Month><Day>27</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Int J Syst Evol Microbiol</MedlineTA><NlmUniqueID>100899600</NlmUniqueID><ISSNLinking>1466-5026</ISSNLinking></MedlineJournalInfo></MedlineCitation><PubmedData><History><PubMedPubDate 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Yang</name></region><name sortKey="Balci, Y" sort="Balci, Y" uniqKey="Balci Y" first="Y" last="Balci">Y. Balci</name><name sortKey="Brazee, N J" sort="Brazee, N J" uniqKey="Brazee N" first="N J" last="Brazee">N J Brazee</name><name sortKey="Hong, C X" sort="Hong, C X" uniqKey="Hong C" first="C X" last="Hong">C X Hong</name><name sortKey="Loyd, A L" sort="Loyd, A L" uniqKey="Loyd A" first="A L" last="Loyd">A L Loyd</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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